diff --git a/cmd/server.go b/cmd/server.go
index caa1351f7..e9326cd1b 100644
--- a/cmd/server.go
+++ b/cmd/server.go
@@ -90,6 +90,7 @@ const (
 	GHAppKeyFlag                     = "gh-app-key"
 	GHAppKeyFileFlag                 = "gh-app-key-file"
 	GHAppSlugFlag                    = "gh-app-slug"
+	GHInstallationIDFlag             = "gh-installation-id"
 	GHOrganizationFlag               = "gh-org"
 	GHWebhookSecretFlag              = "gh-webhook-secret"               // nolint: gosec
 	GHAllowMergeableBypassApply      = "gh-allow-mergeable-bypass-apply" // nolint: gosec
@@ -618,6 +619,13 @@ var int64Flags = map[string]int64Flag{
 		description:  "GitHub App Id. If defined, initializes the GitHub client with app-based credentials",
 		defaultValue: 0,
 	},
+	GHInstallationIDFlag: {
+		description: "GitHub Installation Id. If defined, initializes the GitHub client with app-based credentials " +
+			"using this specific GitHub Application Installation ID, otherwise it attempts to auto-detect it. " +
+			"Note that this value must be set if you want to have one App and multiple installations of that same " +
+			"application.",
+		defaultValue: 0,
+	},
 }
 
 // ValidLogLevels are the valid log levels that can be set
diff --git a/cmd/server_test.go b/cmd/server_test.go
index 1d5ff3c77..db181f93a 100644
--- a/cmd/server_test.go
+++ b/cmd/server_test.go
@@ -91,6 +91,7 @@ var testFlags = map[string]interface{}{
 	GHAppKeyFlag:                     "",
 	GHAppKeyFileFlag:                 "",
 	GHAppSlugFlag:                    "atlantis",
+	GHInstallationIDFlag:             int64(0),
 	GHOrganizationFlag:               "",
 	GHWebhookSecretFlag:              "secret",
 	GiteaBaseURLFlag:                 "http://localhost",
@@ -746,6 +747,21 @@ func TestExecute_GithubApp(t *testing.T) {
 	Equals(t, int64(1), passedConfig.GithubAppID)
 }
 
+func TestExecute_GithubAppWithInstallationID(t *testing.T) {
+	t.Log("Should pass the installation ID to the config.")
+	c := setup(map[string]interface{}{
+		GHAppKeyFlag:         testdata.GithubPrivateKey,
+		GHAppIDFlag:          "1",
+		GHInstallationIDFlag: "2",
+		RepoAllowlistFlag:    "*",
+	}, t)
+	err := c.Execute()
+	Ok(t, err)
+
+	Equals(t, int64(1), passedConfig.GithubAppID)
+	Equals(t, int64(2), passedConfig.GithubInstallationID)
+}
+
 func TestExecute_GiteaUser(t *testing.T) {
 	t.Log("Should remove the @ from the gitea username if it's passed.")
 	c := setup(map[string]interface{}{
diff --git a/e2e/go.mod b/e2e/go.mod
index b1d719e5a..786275678 100644
--- a/e2e/go.mod
+++ b/e2e/go.mod
@@ -7,7 +7,4 @@ require (
 	github.com/hashicorp/go-multierror v1.1.1
 )
 
-require (
-	github.com/google/go-querystring v1.1.0 // indirect
-	github.com/hashicorp/errwrap v1.1.0 // indirect
-)
+require github.com/hashicorp/errwrap v1.1.0 // indirect
diff --git a/go.mod b/go.mod
index 977cbcb04..279aa2394 100644
--- a/go.mod
+++ b/go.mod
@@ -47,19 +47,15 @@ require (
 	github.com/xanzy/go-gitlab v0.102.0
 	go.etcd.io/bbolt v1.3.10
 	go.uber.org/zap v1.27.0
-	golang.org/x/term v0.19.0
-	golang.org/x/text v0.14.0
+	golang.org/x/term v0.20.0
+	golang.org/x/text v0.15.0
 	gopkg.in/yaml.v3 v3.0.1
 )
 
 require (
 	github.com/agext/levenshtein v1.2.3
 	github.com/asaskevich/govalidator v0.0.0-20230301143203-a9d515a09cc2 // indirect
-	github.com/go-playground/locales v0.14.1 // indirect
-	github.com/go-playground/universal-translator v0.18.1 // indirect
 	github.com/hashicorp/hcl/v2 v2.20.1
-	github.com/inconshreveable/mousetrap v1.1.0 // indirect
-	github.com/leodido/go-urn v1.4.0 // indirect
 	github.com/shurcooL/graphql v0.0.0-20220606043923-3cf50f8a0a29 // indirect
 	go.uber.org/atomic v1.11.0 // indirect
 )
@@ -82,6 +78,8 @@ require (
 	github.com/fsnotify/fsnotify v1.7.0 // indirect
 	github.com/gabriel-vasile/mimetype v1.4.3 // indirect
 	github.com/go-fed/httpsig v1.1.0 // indirect
+	github.com/go-playground/locales v0.14.1 // indirect
+	github.com/go-playground/universal-translator v0.18.1 // indirect
 	github.com/golang-jwt/jwt/v4 v4.5.0 // indirect
 	github.com/golang/protobuf v1.5.3 // indirect
 	github.com/google/go-cmp v0.6.0 // indirect
@@ -92,15 +90,17 @@ require (
 	github.com/gookit/gsr v0.1.0 // indirect
 	github.com/gookit/slog v0.5.5 // indirect
 	github.com/gorilla/css v1.0.0 // indirect
-	github.com/hashicorp/errwrap v1.1.0 // indirect
+	github.com/hashicorp/errwrap v1.0.0 // indirect
 	github.com/hashicorp/go-cleanhttp v0.5.2 // indirect
 	github.com/hashicorp/go-retryablehttp v0.7.4 // indirect
 	github.com/hashicorp/go-safetemp v1.0.0 // indirect
 	github.com/hashicorp/hcl v1.0.0 // indirect
 	github.com/huandu/xstrings v1.4.0 // indirect
 	github.com/imdario/mergo v0.3.16 // indirect
+	github.com/inconshreveable/mousetrap v1.1.0 // indirect
 	github.com/klauspost/compress v1.17.0 // indirect
 	github.com/kr/text v0.2.0 // indirect
+	github.com/leodido/go-urn v1.4.0 // indirect
 	github.com/magiconair/properties v1.8.7 // indirect
 	github.com/mattn/go-colorable v0.1.13 // indirect
 	github.com/mattn/go-isatty v0.0.20 // indirect
@@ -131,15 +131,15 @@ require (
 	github.com/yuin/gopher-lua v1.1.1 // indirect
 	github.com/zclconf/go-cty v1.14.4 // indirect
 	go.uber.org/multierr v1.11.0 // indirect
-	golang.org/x/crypto v0.22.0 // indirect
+	golang.org/x/crypto v0.23.0 // indirect
 	golang.org/x/exp v0.0.0-20231006140011-7918f672742d // indirect
-	golang.org/x/mod v0.13.0 // indirect
-	golang.org/x/net v0.23.0 // indirect
+	golang.org/x/mod v0.17.0 // indirect
+	golang.org/x/net v0.25.0 // indirect
 	golang.org/x/oauth2 v0.15.0 // indirect
-	golang.org/x/sync v0.5.0 // indirect
-	golang.org/x/sys v0.19.0 // indirect
+	golang.org/x/sync v0.7.0 // indirect
+	golang.org/x/sys v0.20.0 // indirect
 	golang.org/x/time v0.5.0 // indirect
-	golang.org/x/tools v0.14.0 // indirect
+	golang.org/x/tools v0.21.0 // indirect
 	google.golang.org/appengine v1.6.7 // indirect
 	google.golang.org/protobuf v1.33.0 // indirect
 	gopkg.in/ini.v1 v1.67.0 // indirect
diff --git a/go.sum b/go.sum
index 24c36a6e5..4bdbab874 100644
--- a/go.sum
+++ b/go.sum
@@ -230,9 +230,8 @@ github.com/gorilla/mux v1.8.1/go.mod h1:AKf9I4AEqPTmMytcMc0KkNouC66V3BtZ4qD5fmWS
 github.com/gorilla/websocket v1.4.2/go.mod h1:YR8l580nyteQvAITg2hZ9XVh4b55+EU/adAjf1fMHhE=
 github.com/gorilla/websocket v1.5.1 h1:gmztn0JnHVt9JZquRuzLw3g4wouNVzKL15iLr/zn/QY=
 github.com/gorilla/websocket v1.5.1/go.mod h1:x3kM2JMyaluk02fnUJpQuwD2dCS5NDG2ZHL0uE0tcaY=
+github.com/hashicorp/errwrap v1.0.0 h1:hLrqtEDnRye3+sgx6z4qVLNuviH3MR5aQ0ykNJa/UYA=
 github.com/hashicorp/errwrap v1.0.0/go.mod h1:YH+1FKiLXxHSkmPseP+kNlulaMuP3n2brvKWEqk/Jc4=
-github.com/hashicorp/errwrap v1.1.0 h1:OxrOeh75EUXMY8TBjag2fzXGZ40LB6IKw45YeGUDY2I=
-github.com/hashicorp/errwrap v1.1.0/go.mod h1:YH+1FKiLXxHSkmPseP+kNlulaMuP3n2brvKWEqk/Jc4=
 github.com/hashicorp/go-cleanhttp v0.5.2 h1:035FKYIWjmULyFRBKPs8TBQoi0x6d9G4xc9neXJWAZQ=
 github.com/hashicorp/go-cleanhttp v0.5.2/go.mod h1:kO/YDlP8L1346E6Sodw+PrpBSV4/SoxCXGY6BqNFT48=
 github.com/hashicorp/go-getter/v2 v2.2.1 h1:2JXqPZs1Jej67RtdTi0YZaEB2hEFB3fkBA4cPYKQwFQ=
@@ -486,6 +485,8 @@ golang.org/x/crypto v0.3.0/go.mod h1:hebNnKkNXi2UzZN1eVRvBB7co0a+JxK6XbPiWVs/3J4
 golang.org/x/crypto v0.17.0/go.mod h1:gCAAfMLgwOJRpTjQ2zCCt2OcSfYMTeZVSRtQlPC7Nq4=
 golang.org/x/crypto v0.22.0 h1:g1v0xeRhjcugydODzvb3mEM9SQ0HGp9s/nh3COQ/C30=
 golang.org/x/crypto v0.22.0/go.mod h1:vr6Su+7cTlO45qkww3VDJlzDn0ctJvRgYbC2NvXHt+M=
+golang.org/x/crypto v0.23.0 h1:dIJU/v2J8Mdglj/8rJ6UUOM3Zc9zLZxVZwwxMooUSAI=
+golang.org/x/crypto v0.23.0/go.mod h1:CKFgDieR+mRhux2Lsu27y0fO304Db0wZe70UKqHu0v8=
 golang.org/x/exp v0.0.0-20190121172915-509febef88a4/go.mod h1:CJ0aWSM057203Lf6IL+f9T1iT9GByDxfZKAQTCR3kQA=
 golang.org/x/exp v0.0.0-20190306152737-a1d7652674e8/go.mod h1:CJ0aWSM057203Lf6IL+f9T1iT9GByDxfZKAQTCR3kQA=
 golang.org/x/exp v0.0.0-20190510132918-efd6b22b2522/go.mod h1:ZjyILWgesfNpC6sMxTJOJm9Kp84zZh5NQWvqDGG3Qr8=
@@ -522,6 +523,8 @@ golang.org/x/mod v0.6.0-dev.0.20220419223038-86c51ed26bb4/go.mod h1:jJ57K6gSWd91
 golang.org/x/mod v0.8.0/go.mod h1:iBbtSCu2XBx23ZKBPSOrRkjjQPZFPuis4dIYUhu/chs=
 golang.org/x/mod v0.13.0 h1:I/DsJXRlw/8l/0c24sM9yb0T4z9liZTduXvdAWYiysY=
 golang.org/x/mod v0.13.0/go.mod h1:hTbmBsO62+eylJbnUtE2MGJUyE7QWk4xUqPFrRgJ+7c=
+golang.org/x/mod v0.17.0 h1:zY54UmvipHiNd+pm+m0x9KhZ9hl1/7QNMyxXbc6ICqA=
+golang.org/x/mod v0.17.0/go.mod h1:hTbmBsO62+eylJbnUtE2MGJUyE7QWk4xUqPFrRgJ+7c=
 golang.org/x/net v0.0.0-20180724234803-3673e40ba225/go.mod h1:mL1N/T3taQHkDXs73rZJwtUhF3w3ftmwwsq0BUmARs4=
 golang.org/x/net v0.0.0-20180826012351-8a410e7b638d/go.mod h1:mL1N/T3taQHkDXs73rZJwtUhF3w3ftmwwsq0BUmARs4=
 golang.org/x/net v0.0.0-20181114220301-adae6a3d119a/go.mod h1:mL1N/T3taQHkDXs73rZJwtUhF3w3ftmwwsq0BUmARs4=
@@ -560,6 +563,8 @@ golang.org/x/net v0.6.0/go.mod h1:2Tu9+aMcznHK/AK1HMvgo6xiTLG5rD5rZLDS+rp2Bjs=
 golang.org/x/net v0.10.0/go.mod h1:0qNGK6F8kojg2nk9dLZ2mShWaEBan6FAoqfSigmmuDg=
 golang.org/x/net v0.23.0 h1:7EYJ93RZ9vYSZAIb2x3lnuvqO5zneoD6IvWjuhfxjTs=
 golang.org/x/net v0.23.0/go.mod h1:JKghWKKOSdJwpW2GEx0Ja7fmaKnMsbu+MWVZTokSYmg=
+golang.org/x/net v0.25.0 h1:d/OCCoBEUq33pjydKrGQhw7IlUPI2Oylr+8qLx49kac=
+golang.org/x/net v0.25.0/go.mod h1:JkAGAh7GEvH74S6FOH42FLoXpXbE/aqXSrIQjXgsiwM=
 golang.org/x/oauth2 v0.0.0-20180821212333-d2e6202438be/go.mod h1:N/0e6XlmueqKjAGxoOufVs8QHGRruUQn6yWY3a++T0U=
 golang.org/x/oauth2 v0.0.0-20190226205417-e64efc72b421/go.mod h1:gOpvHmFTYa4IltrdGE7lF6nIHvwfUNPOp7c8zoXwtLw=
 golang.org/x/oauth2 v0.0.0-20190402181905-9f3314589c9a/go.mod h1:gOpvHmFTYa4IltrdGE7lF6nIHvwfUNPOp7c8zoXwtLw=
@@ -583,6 +588,8 @@ golang.org/x/sync v0.0.0-20220722155255-886fb9371eb4/go.mod h1:RxMgew5VJxzue5/jJ
 golang.org/x/sync v0.1.0/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
 golang.org/x/sync v0.5.0 h1:60k92dhOjHxJkrqnwsfl8KuaHbn/5dl0lUPUklKo3qE=
 golang.org/x/sync v0.5.0/go.mod h1:Czt+wKu1gCyEFDUtn0jG5QVvpJ6rzVqr5aXyt9drQfk=
+golang.org/x/sync v0.7.0 h1:YsImfSBoP9QPYL0xyKJPq0gcaJdG3rInoqxTWbfQu9M=
+golang.org/x/sync v0.7.0/go.mod h1:Czt+wKu1gCyEFDUtn0jG5QVvpJ6rzVqr5aXyt9drQfk=
 golang.org/x/sys v0.0.0-20180830151530-49385e6e1522/go.mod h1:STP8DvDyc/dI5b8T5hshtkjS+E42TnysNCUPdjciGhY=
 golang.org/x/sys v0.0.0-20180905080454-ebe1bf3edb33/go.mod h1:STP8DvDyc/dI5b8T5hshtkjS+E42TnysNCUPdjciGhY=
 golang.org/x/sys v0.0.0-20181116152217-5ac8a444bdc5/go.mod h1:STP8DvDyc/dI5b8T5hshtkjS+E42TnysNCUPdjciGhY=
@@ -632,6 +639,8 @@ golang.org/x/sys v0.8.0/go.mod h1:oPkhp1MJrh7nUepCBck5+mAzfO9JrbApNNgaTdGDITg=
 golang.org/x/sys v0.15.0/go.mod h1:/VUhepiaJMQUp4+oa/7Zr1D23ma6VTLIYjOOTFZPUcA=
 golang.org/x/sys v0.19.0 h1:q5f1RH2jigJ1MoAWp2KTp3gm5zAGFUTarQZ5U386+4o=
 golang.org/x/sys v0.19.0/go.mod h1:/VUhepiaJMQUp4+oa/7Zr1D23ma6VTLIYjOOTFZPUcA=
+golang.org/x/sys v0.20.0 h1:Od9JTbYCk261bKm4M/mw7AklTlFYIa0bIp9BgSm1S8Y=
+golang.org/x/sys v0.20.0/go.mod h1:/VUhepiaJMQUp4+oa/7Zr1D23ma6VTLIYjOOTFZPUcA=
 golang.org/x/term v0.0.0-20201126162022-7de9c90e9dd1/go.mod h1:bj7SfCRtBDWHUb9snDiAeCFNEtKQo2Wmx5Cou7ajbmo=
 golang.org/x/term v0.0.0-20210927222741-03fcf44c2211/go.mod h1:jbD1KX2456YbFQfuXm/mYQcufACuNUgVhRMnK/tPxf8=
 golang.org/x/term v0.2.0/go.mod h1:TVmDHMZPmdnySmBfhjOoOdhjzdE1h4u1VwSiw2l1Nuc=
@@ -640,6 +649,8 @@ golang.org/x/term v0.8.0/go.mod h1:xPskH00ivmX89bAKVGSKKtLOWNx2+17Eiy94tnKShWo=
 golang.org/x/term v0.15.0/go.mod h1:BDl952bC7+uMoWR75FIrCDx79TPU9oHkTZ9yRbYOrX0=
 golang.org/x/term v0.19.0 h1:+ThwsDv+tYfnJFhF4L8jITxu1tdTWRTZpdsWgEgjL6Q=
 golang.org/x/term v0.19.0/go.mod h1:2CuTdWZ7KHSQwUzKva0cbMg6q2DMI3Mmxp+gKJbskEk=
+golang.org/x/term v0.20.0 h1:VnkxpohqXaOBYJtBmEppKUG6mXpi+4O6purfc2+sMhw=
+golang.org/x/term v0.20.0/go.mod h1:8UkIAJTvZgivsXaD6/pH6U9ecQzZ45awqEOzuCvwpFY=
 golang.org/x/text v0.0.0-20170915032832-14c0d48ead0c/go.mod h1:NqM8EUOU14njkJ3fqMW+pc6Ldnwhi/IjpwHt7yyuwOQ=
 golang.org/x/text v0.3.0/go.mod h1:NqM8EUOU14njkJ3fqMW+pc6Ldnwhi/IjpwHt7yyuwOQ=
 golang.org/x/text v0.3.1-0.20180807135948-17ff2d5776d2/go.mod h1:NqM8EUOU14njkJ3fqMW+pc6Ldnwhi/IjpwHt7yyuwOQ=
@@ -652,6 +663,8 @@ golang.org/x/text v0.7.0/go.mod h1:mrYo+phRRbMaCq/xk9113O4dZlRixOauAjOtrjsXDZ8=
 golang.org/x/text v0.9.0/go.mod h1:e1OnstbJyHTd6l/uOt8jFFHp6TRDWZR/bV3emEE/zU8=
 golang.org/x/text v0.14.0 h1:ScX5w1eTa3QqT8oi6+ziP7dTV1S2+ALU0bI+0zXKWiQ=
 golang.org/x/text v0.14.0/go.mod h1:18ZOQIKpY8NJVqYksKHtTdi31H5itFRjB5/qKTNYzSU=
+golang.org/x/text v0.15.0 h1:h1V/4gjBv8v9cjcR6+AR5+/cIYK5N/WAgiv4xlsEtAk=
+golang.org/x/text v0.15.0/go.mod h1:18ZOQIKpY8NJVqYksKHtTdi31H5itFRjB5/qKTNYzSU=
 golang.org/x/time v0.0.0-20181108054448-85acf8d2951c/go.mod h1:tRJNPiyCQ0inRvYxbN9jk5I+vvW/OXSQhTDSoE431IQ=
 golang.org/x/time v0.0.0-20190308202827-9d24e82272b4/go.mod h1:tRJNPiyCQ0inRvYxbN9jk5I+vvW/OXSQhTDSoE431IQ=
 golang.org/x/time v0.0.0-20191024005414-555d28b269f0/go.mod h1:tRJNPiyCQ0inRvYxbN9jk5I+vvW/OXSQhTDSoE431IQ=
@@ -701,6 +714,8 @@ golang.org/x/tools v0.1.12/go.mod h1:hNGJHUnrk76NpqgfD5Aqm5Crs+Hm0VOH/i9J2+nxYbc
 golang.org/x/tools v0.6.0/go.mod h1:Xwgl3UAJ/d3gWutnCtw505GrjyAbvKui8lOU390QaIU=
 golang.org/x/tools v0.14.0 h1:jvNa2pY0M4r62jkRQ6RwEZZyPcymeL9XZMLBbV7U2nc=
 golang.org/x/tools v0.14.0/go.mod h1:uYBEerGOWcJyEORxN+Ek8+TT266gXkNlHdJBwexUsBg=
+golang.org/x/tools v0.21.0 h1:qc0xYgIbsSDt9EyWz05J5wfa7LOVW0YTLOXrqdLAWIw=
+golang.org/x/tools v0.21.0/go.mod h1:aiJjzUbINMkxbQROHiO6hDPo2LHcIPhhQsa9DLh0yGk=
 golang.org/x/xerrors v0.0.0-20190717185122-a985d3407aa7/go.mod h1:I/5z698sn9Ka8TeJc9MKroUUfqBBauWjQqLJ2OPfmY0=
 golang.org/x/xerrors v0.0.0-20191011141410-1b5146add898/go.mod h1:I/5z698sn9Ka8TeJc9MKroUUfqBBauWjQqLJ2OPfmY0=
 golang.org/x/xerrors v0.0.0-20191204190536-9bdfabe68543/go.mod h1:I/5z698sn9Ka8TeJc9MKroUUfqBBauWjQqLJ2OPfmY0=
diff --git a/runatlantis.io/docs/server-configuration.md b/runatlantis.io/docs/server-configuration.md
index 439e55d48..d2ba3653b 100644
--- a/runatlantis.io/docs/server-configuration.md
+++ b/runatlantis.io/docs/server-configuration.md
@@ -687,6 +687,21 @@ and set `--autoplan-modules` to `false`.
   Hostname of your GitHub Enterprise installation. If using [GitHub.com](https://github.com),
   don't set. Defaults to `github.com`.
 
+### `--gh-installation-id`
+
+  ```bash
+  atlantis server --gh-installation-id="123"
+  # or
+  ATLANTIS_GH_INSTALLATION_ID="123"
+  ```
+
+The installation ID of a specific instance of a GitHub application. Normally this value is
+derived by querying GitHub for the list of installations of the ID supplied via `--gh-app-id` and selecting
+the first one found and where multiple installations results in an error. Use this flag if you have multiple
+instances of Atlantis but you want to use a single already-installed GitHub app for all of them. You would normally do this if
+you are running a proxy as your single GitHub application that will proxy to an appropriate Atlantis instance
+based on the organization or user that triggered the webhook.
+
 ### `--gh-org`
 
   ```bash
diff --git a/server/events/mock_workingdir_test.go b/server/events/mock_workingdir_test.go
index c2e070cfe..d298b2cee 100644
--- a/server/events/mock_workingdir_test.go
+++ b/server/events/mock_workingdir_test.go
@@ -4,11 +4,12 @@
 package events
 
 import (
+	"reflect"
+	"time"
+
 	pegomock "github.com/petergtz/pegomock/v4"
 	models "github.com/runatlantis/atlantis/server/events/models"
 	logging "github.com/runatlantis/atlantis/server/logging"
-	"reflect"
-	"time"
 )
 
 type MockWorkingDir struct {
diff --git a/server/events/vcs/github_credentials.go b/server/events/vcs/github_credentials.go
index 116b5bead..d1d59bffa 100644
--- a/server/events/vcs/github_credentials.go
+++ b/server/events/vcs/github_credentials.go
@@ -71,7 +71,7 @@ type GithubAppCredentials struct {
 	Key            []byte
 	Hostname       string
 	apiURL         *url.URL
-	installationID int64
+	InstallationID int64
 	tr             *ghinstallation.Transport
 	AppSlug        string
 }
@@ -122,8 +122,8 @@ func (c *GithubAppCredentials) GetToken() (string, error) {
 }
 
 func (c *GithubAppCredentials) getInstallationID() (int64, error) {
-	if c.installationID != 0 {
-		return c.installationID, nil
+	if c.InstallationID != 0 {
+		return c.InstallationID, nil
 	}
 
 	tr := http.DefaultTransport
@@ -148,8 +148,8 @@ func (c *GithubAppCredentials) getInstallationID() (int64, error) {
 		return 0, fmt.Errorf("wrong number of installations, expected 1, found %d", len(installations))
 	}
 
-	c.installationID = installations[0].GetID()
-	return c.installationID, nil
+	c.InstallationID = installations[0].GetID()
+	return c.InstallationID, nil
 }
 
 func (c *GithubAppCredentials) transport() (*ghinstallation.Transport, error) {
diff --git a/server/events/vcs/github_credentials_test.go b/server/events/vcs/github_credentials_test.go
index f6604adfa..f5a4d33f0 100644
--- a/server/events/vcs/github_credentials_test.go
+++ b/server/events/vcs/github_credentials_test.go
@@ -69,3 +69,40 @@ func TestGithubClient_AppAuthentication(t *testing.T) {
 		t.Errorf("app token was not cached: %q != %q", token, newToken)
 	}
 }
+
+func TestGithubClient_MultipleAppAuthentication(t *testing.T) {
+	logger := logging.NewNoopLogger(t)
+	defer disableSSLVerification()()
+	testServer, err := testdata.GithubMultipleAppTestServer(t)
+	Ok(t, err)
+
+	anonCreds := &vcs.GithubAnonymousCredentials{}
+	anonClient, err := vcs.NewGithubClient(testServer, anonCreds, vcs.GithubConfig{}, logging.NewNoopLogger(t))
+	Ok(t, err)
+	tempSecrets, err := anonClient.ExchangeCode(logger, "good-code")
+	Ok(t, err)
+
+	appCreds := &vcs.GithubAppCredentials{
+		AppID:          tempSecrets.ID,
+		InstallationID: 1,
+		Key:            []byte(testdata.GithubPrivateKey),
+		Hostname:       testServer,
+	}
+	_, err = vcs.NewGithubClient(testServer, appCreds, vcs.GithubConfig{}, logging.NewNoopLogger(t))
+	Ok(t, err)
+
+	token, err := appCreds.GetToken()
+	Ok(t, err)
+
+	newToken, err := appCreds.GetToken()
+	Ok(t, err)
+
+	user, err := appCreds.GetUser()
+	Ok(t, err)
+
+	Assert(t, user == "", "user should be empty")
+
+	if token != newToken {
+		t.Errorf("app token was not cached: %q != %q", token, newToken)
+	}
+}
diff --git a/server/events/vcs/testdata/fixtures.go b/server/events/vcs/testdata/fixtures.go
index 94926edba..2872892f2 100644
--- a/server/events/vcs/testdata/fixtures.go
+++ b/server/events/vcs/testdata/fixtures.go
@@ -496,6 +496,79 @@ var githubAppInstallationJSON = `[
 	}
 ]`
 
+var githubAppMultipleInstallationJSON = `[
+	{
+		"id": 1,
+		"account": {
+			"login": "github",
+			"id": 1,
+			"node_id": "MDEyOk9yZ2FuaXphdGlvbjE=",
+			"url": "https://api.github.com/orgs/github",
+			"repos_url": "https://api.github.com/orgs/github/repos",
+			"events_url": "https://api.github.com/orgs/github/events",
+			"hooks_url": "https://api.github.com/orgs/github/hooks",
+			"issues_url": "https://api.github.com/orgs/github/issues",
+			"members_url": "https://api.github.com/orgs/github/members{/member}",
+			"public_members_url": "https://api.github.com/orgs/github/public_members{/member}",
+			"avatar_url": "https://github.com/images/error/octocat_happy.gif",
+			"description": "A great organization"
+		},
+		"access_tokens_url": "https://api.github.com/installations/1/access_tokens",
+		"repositories_url": "https://api.github.com/installation/repositories",
+		"html_url": "https://github.com/organizations/github/settings/installations/1",
+		"app_id": 1,
+		"target_id": 1,
+		"target_type": "Organization",
+		"permissions": {
+			"metadata": "read",
+			"contents": "read",
+			"issues": "write",
+			"single_file": "write"
+		},
+		"events": [
+			"push",
+			"pull_request"
+		],
+		"single_file_name": "config.yml",
+		"repository_selection": "selected"
+	},
+	{
+		"id": 2,
+		"account": {
+			"login": "github",
+			"id": 1,
+			"node_id": "MDEyOk9yZ2FuaXphdGlvbjE=",
+			"url": "https://api.github.com/orgs/github",
+			"repos_url": "https://api.github.com/orgs/github/repos",
+			"events_url": "https://api.github.com/orgs/github/events",
+			"hooks_url": "https://api.github.com/orgs/github/hooks",
+			"issues_url": "https://api.github.com/orgs/github/issues",
+			"members_url": "https://api.github.com/orgs/github/members{/member}",
+			"public_members_url": "https://api.github.com/orgs/github/public_members{/member}",
+			"avatar_url": "https://github.com/images/error/octocat_happy.gif",
+			"description": "A great organization"
+		},
+		"access_tokens_url": "https://api.github.com/installations/1/access_tokens",
+		"repositories_url": "https://api.github.com/installation/repositories",
+		"html_url": "https://github.com/organizations/github/settings/installations/1",
+		"app_id": 1,
+		"target_id": 1,
+		"target_type": "Organization",
+		"permissions": {
+			"metadata": "read",
+			"contents": "read",
+			"issues": "write",
+			"single_file": "write"
+		},
+		"events": [
+			"push",
+			"pull_request"
+		],
+		"single_file_name": "config.yml",
+		"repository_selection": "selected"
+	}
+]`
+
 // nolint: gosec
 var githubAppTokenJSON = `{
 	"token":      "some-token",
@@ -741,3 +814,58 @@ func GithubAppTestServer(t *testing.T) (string, error) {
 
 	return testServerURL.Host, err
 }
+
+func GithubMultipleAppTestServer(t *testing.T) (string, error) {
+	counter := 0
+	testServer := httptest.NewTLSServer(
+		http.HandlerFunc(func(w http.ResponseWriter, r *http.Request) {
+			switch r.RequestURI {
+			case "/api/v3/app-manifests/good-code/conversions":
+				encodedKey := strings.Join(strings.Split(GithubPrivateKey, "\n"), "\\n")
+				appInfo := fmt.Sprintf(githubConversionJSON, encodedKey)
+				w.Write([]byte(appInfo)) // nolint: errcheck
+			// https://developer.github.com/v3/apps/#list-installations
+			case "/api/v3/app/installations":
+				token := strings.Replace(r.Header.Get("Authorization"), "Bearer ", "", 1)
+				if err := validateGithubToken(token); err != nil {
+					w.WriteHeader(403)
+					w.Write([]byte("Invalid token")) // nolint: errcheck
+					return
+				}
+
+				w.Write([]byte(githubAppMultipleInstallationJSON)) // nolint: errcheck
+				return
+			case "/api/v3/apps/some-app":
+				token := strings.Replace(r.Header.Get("Authorization"), "token ", "", 1)
+
+				// token is taken from githubAppTokenJSON
+				if token != "some-token" {
+					w.WriteHeader(403)
+					w.Write([]byte("Invalid installation token")) // nolint: errcheck
+					return
+				}
+				w.Write([]byte(githubAppJSON)) // nolint: errcheck
+				return
+			case "/api/v3/app/installations/1/access_tokens":
+				token := strings.Replace(r.Header.Get("Authorization"), "Bearer ", "", 1)
+				if err := validateGithubToken(token); err != nil {
+					w.WriteHeader(403)
+					w.Write([]byte("Invalid token")) // nolint: errcheck
+					return
+				}
+
+				appToken := fmt.Sprintf(githubAppTokenJSON, counter)
+				counter++
+				w.Write([]byte(appToken)) // nolint: errcheck
+				return
+			default:
+				t.Errorf("got unexpected request at %q", r.RequestURI)
+				http.Error(w, "not found", http.StatusNotFound)
+				return
+			}
+		}))
+
+	testServerURL, err := url.Parse(testServer.URL)
+
+	return testServerURL.Host, err
+}
diff --git a/server/server.go b/server/server.go
index 215b5dd02..859f42323 100644
--- a/server/server.go
+++ b/server/server.go
@@ -239,18 +239,20 @@ func NewServer(userConfig UserConfig, config Config) (*Server, error) {
 				return nil, err
 			}
 			githubCredentials = &vcs.GithubAppCredentials{
-				AppID:    userConfig.GithubAppID,
-				Key:      privateKey,
-				Hostname: userConfig.GithubHostname,
-				AppSlug:  userConfig.GithubAppSlug,
+				AppID:          userConfig.GithubAppID,
+				InstallationID: userConfig.GithubInstallationID,
+				Key:            privateKey,
+				Hostname:       userConfig.GithubHostname,
+				AppSlug:        userConfig.GithubAppSlug,
 			}
 			githubAppEnabled = true
 		} else if userConfig.GithubAppID != 0 && userConfig.GithubAppKey != "" {
 			githubCredentials = &vcs.GithubAppCredentials{
-				AppID:    userConfig.GithubAppID,
-				Key:      []byte(userConfig.GithubAppKey),
-				Hostname: userConfig.GithubHostname,
-				AppSlug:  userConfig.GithubAppSlug,
+				AppID:          userConfig.GithubAppID,
+				InstallationID: userConfig.GithubInstallationID,
+				Key:            []byte(userConfig.GithubAppKey),
+				Hostname:       userConfig.GithubHostname,
+				AppSlug:        userConfig.GithubAppSlug,
 			}
 			githubAppEnabled = true
 		}
diff --git a/server/user_config.go b/server/user_config.go
index 8109a3027..580162ea9 100644
--- a/server/user_config.go
+++ b/server/user_config.go
@@ -57,6 +57,7 @@ type UserConfig struct {
 	GithubAppKey                    string `mapstructure:"gh-app-key"`
 	GithubAppKeyFile                string `mapstructure:"gh-app-key-file"`
 	GithubAppSlug                   string `mapstructure:"gh-app-slug"`
+	GithubInstallationID            int64  `mapstructure:"gh-installation-id"`
 	GithubTeamAllowlist             string `mapstructure:"gh-team-allowlist"`
 	GiteaBaseURL                    string `mapstructure:"gitea-base-url"`
 	GiteaToken                      string `mapstructure:"gitea-token"`